Student will understand the basics of microbial processes happening in the environment in order to maintain equilibrium. In addition, students will acquire both theoretical and practical knowledge in the field of microbial diversity analyses.

Student po absolvování předmětu bude rozumět mikrobiální podstatě důležitých procesů probíhajících v životním prostředí za účelem udržení rovnováhy. Zároveň si osvojí teoretické i praktické znalosti a dovednosti v oblasti analýzy mikrobiální diversity.

R: Eugene L. Madsen: Environmental Microbiology: From Genomes to Biogeochemistry; John Wiley & Sons 2011. ISBN 1444357980, 9781444357981

R: Terry Gentry, Raina M. Maier, Ian L. Pepper, Charles P. Gerba: Environmental Microbiology; Academic Press 2008. ISBN 0123705193, 9780123705198.

A: Wen-Tso Liu, Janet K. Jansson: Environmental Molecular Microbiology; Horizon Scientific Press 2010. ISBN 1904455522, 9781904455523.

A: Diana Marco: Metagenomics: Theory, Methods and Applications; Horizon Scientific Press 2010. ISBN 1904455549, 9781904455547.

Z: Eugene L. Madsen: Environmental Microbiology: From Genomes to Biogeochemistry; John Wiley & Sons 2011. ISBN 1444357980, 9781444357981

Z: Terry Gentry, Raina M. Maier, Ian L. Pepper, Charles P. Gerba: Environmental Microbiology; Academic Press 2008. ISBN 0123705193, 9780123705198.

D: Wen-Tso Liu, Janet K. Jansson: Environmental Molecular Microbiology; Horizon Scientific Press 2010. ISBN 1904455522, 9781904455523.

D: Diana Marco: Metagenomics: Theory, Methods and Applications; Horizon Scientific Press 2010. ISBN 1904455549, 9781904455547.

1. Biosphere formation.

2. Phylogenetic diversity of microorganisms.

3. Identification of microorganisms.

4. Methods for analyzing microbial diversity.

5. Microbial fuelling.

6. Microbial ecology.

7. Biogeochemical cycles I: Carbon cycle.

8. Biogeochemical cycles II: Nitrogen cycle.

9. Biogeochemical cycles III: Sulfur cycle.

10. Biogeochemical cycles IV: Iron cycle.

11. Catabolic pathways evolution.

12. Biodegradation: strategies for degradation of organic compounds.

13. Microbial bioremediation I: using microbes to remove organic pollutants from the environment.

14. Microbial bioremediation II: using microbes to remove inorganic pollutants from the environment.

http://www.nature.com/ismej/index.html

http://eu.wiley.com/WileyCDA/WileyTitle/productCd-EMI.html

http://aem.asm.org/

http://rdp.cme.msu.edu

http://umbbd.ethz.ch/

http://fungene.cme.msu.edu

http://www.nature.com/ismej/index.html

http://eu.wiley.com/WileyCDA/WileyTitle/productCd-EMI.html

http://aem.asm.org/

http://rdp.cme.msu.edu

http://umbbd.ethz.ch/

http://fungene.cme.msu.edu

Biochemistry I

Microbiology

Biochemie I

Mikrobiologie