SubjectsSubjects(version: 853)
Course, academic year 2019/2020
  
Chemical Informatics - B143001
Title: Chemická informatika
Guaranteed by: Department of Informatics and Chemistry (143)
Actual: from 2019
Semester: both
Points: 2
E-Credits: 2
Examination process:
Hours per week, examination: 1/1 MC [hours/week]
Capacity: winter:unknown / unknown (unknown)
summer:unknown / unknown (unknown)
Min. number of students: unlimited
Language: Czech
Teaching methods: full-time
Level:  
For type: Bachelor's
Note: course can be enrolled in outside the study plan
enabled for web enrollment
you can enroll for the course in winter and in summer semester
Guarantor: Jirát Jiří Ing. Ph.D.
Jelínek Luděk doc. Ing. Ph.D.
Raich Ivan doc. Dr. Ing.
Interchangeability : N111003, N143013, N143013A
Annotation -
Last update: Kubová Petra Ing. (04.12.2017)
Introductory course aimed at getting basic necessary skills for work with scientific chemistry literature, chemistry and multiple-fields databases. Hands-on training are integral part of the course, ensuring required skills are properly trained.
Aim of the course -
Last update: Kubová Petra Ing. (04.12.2017)

Students will be able to:

Understand the basics of scientific publishing process including open-access possibilities

Find and locate documents of various types - scholarly articles, books, e-books, patents, standards; use basic library services, search in catalogue

Work with reference management software, cite research literature

Use citation, factographic, structure and reaction databases on basic level, create query using logical and other operators and structure editors

Literature -
Last update: Kubová Petra Ing. (23.02.2018)

R:Chemical Information for Chemists: A Primer. Currano, J.; Roth D., Eds.; RSC Publishing, 2014. http://dx.doi.org/10.1039/9781782620655, 978-1-78262-065-5, DOI:10.1039/9781782620655-00001

A:Chemoinformatics. Gasteiger, J.; Engel, T., Eds. Wiley-VCH Verlag GmbH & Co. KGaA: Weinheim, 2004. http://dx.doi.org/10.1002/3527601643, 9783527601646, DOI:10.1002/3527601643

Learning resources -
Last update: Kubová Petra Ing. (23.02.2018)

1. Jirat, J. Detailed coures instructions. http://ich.vscht.cz/dokuwiki/chemicka_informatika_2011_2012

2. Jirat, J. Lecture and seminar notes for Chemical Informatics course. http://ich.vscht.cz/courses/CHEMINF-1/slides/Output/index.xhtml

3. Součková, A.; Dibuszová, E.; Znamenáček, J. Citation Generator of ICT Press. http://vydavatelstvi.vscht.cz/apps/uid_ea-002/

Requirements to the exam -
Last update: Kubová Petra Ing. (04.12.2017)

Completion of individual miniproject (searching for data) is required.

Syllabus -
Last update: Jirát Jiří Ing. Ph.D. (25.03.2019)

1. Introduction, information flow in science

2. Scholar article - structure, citations

3. Identifiers of publications - ISBN, ISSN, DOI. Boole algebra, Internet search engines

4. Citations, citation databases: Web of Science, Scopus

5. Chemical structures - representation, identifiers, linear notation, connection tables, structure editors

6. Chemical Abstracts - history, structure of the printed version. SciFinder - introduction, bibliographic searching

7. Chemical Abstracts - chemical compounds - nomenclature, CAS RN, summary formulas. Bibliographic data for different types of processed documents. SciFinder - structure and reaction searching

8. Beilstein and Gmelin - history. Reaxys database

9. Patents - patenting procedure

10. Standards - standards development, types of standards. ČSN, ISO, CEN

11. Publishing process - past, present, future. Open access

12. Copyright

13. Excursion to joint ICT Prague and NTK library

14. Wrap-up

Registration requirements -
Last update: Kubová Petra Ing. (04.12.2017)

none

Course completion requirements -
Last update: Jirát Jiří Ing. Ph.D. (09.02.2018)

Assessment based on completion of project

Teaching methods
Activity Credits Hours
Účast na přednáškách 0,5 14
Práce na individuálním projektu 1 28
Účast na seminářích 0,5 14
2 / 2 56 / 56
Coursework assessment
Form Significance
Regular attendance 10
Defense of an individual project 90

 
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