SubjectsSubjects(version: 853)
Course, academic year 2019/2020
  
Bioinformatics Applications - M143005
Title: Aplikace bioinformatiky
Guaranteed by: Department of Informatics and Chemistry (143)
Actual: from 2019
Semester: winter
Points: winter s.:3
E-Credits: winter s.:3
Examination process: winter s.:
Hours per week, examination: winter s.:2/0 Ex [hours/week]
Capacity: unknown / unknown (unknown)
Min. number of students: unlimited
Language: Czech
Teaching methods: full-time
Level:  
For type: Master's (post-Bachelor)
Note: enabled for web enrollment
Guarantor: Vondrášek Jiří RNDr. CSc.
Interchangeability : N143050
Annotation -
Last update: Hladíková Jana (04.01.2018)
The aim of the course is to describe applications of bioinformatics in various scientific fields, and to defined their synergy. Bioinformatics projects in imunology, pharmacy, and in other life science disciplines will be discussed. Students will get acquainted with legal, ethical and commercial issues in bioinformatics, and will be informed about authorship and intellectual property rights. Important international bioinformatics integration proojects will also be introduced.
Aim of the course -
Last update: Hladíková Jana (04.01.2018)

Students will be able to:

  • Create and assess a bioinformatics project.
  • Evaluate legal and economical aspects of bioinformatics projects.
  • Search in patent databases.
  • Will know about principal international bioinformatics projects.
  • Judge economical demands of the bioinformatics research in a given area.
Literature -
Last update: Svozil Daniel doc. Mgr. Ph.D. (04.11.2018)

R: Cvrčková F., Úvod do praktické bioinformatiky, Academia, 2006, ISBN:80-200-1360-1

R: Zvárová J., Biomedicínská informatika V.- Metody molekulární biologie a bioinformatiky, Karolinum, 2013, ISBN: 9788024621500

R: CS Clair, JE Visick, Exploring Bioinformatics: A Project-Based Approach, Jones and Bartlett Publishers 2013, ISBN: 978-1284034240

A: Edward H. Shortliffe, James J. Cimino, Biomedical Informatics: Computer Applications in Health Care and Biomedicine, Springer 2014, ISBN: 978-1447144731

Learning resources -
Last update: Hladíková Jana (04.01.2018)

none

Syllabus -
Last update: Hladíková Jana (04.01.2018)

1. Bioinformatics in biology

2. Bioinformatics in Life Sciences - conventions, data resources, projects

3. Bioinformatics in pharmacology

4. Bioinformatics in imunology

5. Bioinformatics in agriculture

6. Bioinformatics in forestry and in environment protection

7. Geoinformatics

8. Legal, ethical, and commercial aspects of bioinformatics I

9. Legal, ethical, and commercial aspects of bioinformatics II

10. Biosensing

11. Bioinformatics applications in medicine

12. European integrative bioinformatics projects

13. Worldwide integrative bioinformatics projects

14. Bioinformatics in education

Registration requirements -
Last update: Hladíková Jana (04.01.2018)

Biochemistry, Molecular genetics, Introduction to bioinformatics

Course completion requirements -
Last update: Svozil Daniel doc. Mgr. Ph.D. (26.01.2018)

The final exam is written.

Teaching methods
Activity Credits Hours
Účast na přednáškách 1 28
Příprava na přednášky, semináře, laboratoře, exkurzi nebo praxi 1 28
Příprava na zkoušku a její absolvování 1 28
3 / 3 84 / 84
Coursework assessment
Form Significance
Examination test 100

 
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